BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022D05LP1|AL427893
(978 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig179 960 0.0
3x_Contig739 624 e-178
>3x_Contig179
Length = 1756
Score = 960 bits (480), Expect = 0.0
Identities = 492/500 (98%)
Strand = Plus / Plus
Query: 1 aaagagtcaaggtgaacggaaaccagtctacaatgaagtgagamctattcaattttgatg 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1243 aaagagtcaaggtgaacggaaaccagtctacaatgaagtgagatctattcaattttgatg 1302
Query: 61 cattaagacacgaaaagttcttctctggtgaggaaattgtccgtgtcatgtccaaacgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1303 cattaagacacgaaaagttcttctctggtgaggaaattgtccgtgtcatgtccaaacgta 1362
Query: 121 tgtcctttacactcaatacacaaacaatcacgtgatgggaatygttgatggtaaacacat 180
||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1363 tgttctttacactcaatacacaaacaatcacgtgatgggaattgttgatggtaaacacat 1422
Query: 181 ttttctggcggattttccgccagaaaaatgatggcttaccatcaagggtagtccttctgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1423 ttttctggcggattttccgccagaaaaatgatggcttaccatcaagggtagtccttctgt 1482
Query: 241 aaagaatgaaccgcacaattatcccccaaaaacacatttccagcccagtttgaagaggtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1483 aaagaatgaaccgcacaattatcccccaaaaacacatttccagcccagtttgaagaggtt 1542
Query: 301 ttgttggatttttgtcggttttgcatcagcytagacggacaatattggaacttttgaatt 360
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1543 ttgttggatttttgtcggttttgcatcagcttagacggacaatattggaacttttgaatt 1602
Query: 361 ttgaaaacagttttacaaggatttaacaaatgayaacacggcttgttattgagaatgtat 420
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1603 ttgaaaacagttttacaaggatttaacaaatgataacacggcttgttattgagaatgtat 1662
Query: 421 ttgtttagccatatcaacagtgtattgattcagtgtagcgataatataaccagggcaaty 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1663 ttgtttagccatatcaacagtgtattgattcagtgtagcgataatataaccagggcaatt 1722
Query: 481 acyatyagataggaatagtc 500
|| || ||||||||||||||
Sbjct: 1723 actattagataggaatagtc 1742
>3x_Contig739
Length = 2501
Score = 624 bits (312), Expect = e-178
Identities = 324/328 (98%), Gaps = 1/328 (0%)
Strand = Plus / Plus
Query: 652 gtagttctgatgctattgatgctgcagacctatttgaccagtatattaataaggatatgt 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18 gtagttctgatgctattgatgctgcagacctatttgaccagtatattaataaggatatgt 77
Query: 712 tgatggaatcgatagaggacgattcttctcctggtttactcaaattggattttgtgtccc 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 tgatggaatcgatagaggacgattcttctcctggtttactcaaattggattttgtgtccc 137
Query: 772 ctgtgaagatggaaaaccagctacgtacgaatgttgatttattgaagttagatactgatg 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 ctgtgaagatggaaaaccagctacgtacgaatgttgatttattgaagttagatactgatg 197
Query: 832 aaattatggatgtgaatgagcatgaggatgttgacgatcagatgaatgcytctggcggtg 891
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 198 aaattatggatgtgaatgagcatgaggatgttgacgatcagatgaatgcttctggcggtg 257
Query: 892 ttacagatgt-cacgacgatttgactagggaaaatgtcgaacaatggaaactgggagatg 950
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ttacagatgtccacgacgatttgactagggaaaatgtcgaacaatggaaactgggagatg 317
Query: 951 agaaacatagcagtattaacaccggrgt 978
||||||||||||||| ||||||||| ||
Sbjct: 318 agaaacatagcagtaataacaccggagt 345
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6326
Number of Sequences: 1807
Number of extensions: 6326
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 2
length of query: 978
length of database: 10,358,551
effective HSP length: 16
effective length of query: 962
effective length of database: 10,329,639
effective search space: 9937112718
effective search space used: 9937112718
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)